Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Toce_09207TM receptor with intracellular metal dependent phosphohydrolase; COGs: COG1480 membrane-associated HD superfamily hydrolase; InterPro IPR003607:IPR006675:IPR011621:IPR006674; KEGG: dau:Daud_2047 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase 7TM intracellular region; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: 7TM receptor with intracellular metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: 7TM-HD extracellular; HD domain; 7TM receptor with intracellular HD hydrolase; [...] (696 aa)    
Predicted Functional Partners:
Toce_0922
COGs: COG0818 Diacylglycerol kinase; InterPro IPR000829; KEGG: tpd:Teth39_1366 diacylglycerol kinase; PFAM: diacylglycerol kinase; SPTR: Diacylglycerol kinase; PFAM: Prokaryotic diacylglycerol kinase.
 
     0.885
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.878
Toce_0919
PhoH family protein; COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR004087:IPR018111:IPR003714; KEGG: tte:TTE0970 phosphate starvation-inducible protein PhoH, ATPase; PFAM: PhoH family protein; K Homology, type 1, subgroup; SMART: KH domain protein; SPTR: PhoH family protein; PFAM: KH domain; PhoH-like protein.
     
 0.843
Toce_0918
Sporulation protein YqfD; InterPro IPR010690; KEGG: tte:TTE0969 stage IV sporulation protein; PFAM: putative stage IV sporulation YqfD; SPTR: Stage IV sporulation protein; TIGRFAM: sporulation protein YqfD; PFAM: Putative stage IV sporulation protein YqfD; TIGRFAM: sporulation protein YqfD.
       0.798
Toce_0917
KEGG: dae:Dtox_3072 sporulation protein YqfC; SPTR: Sporulation protein YqfC; PFAM: YabP family; TIGRFAM: sporulation protein YqfC.
       0.755
Toce_0923
KEGG: amt:Amet_3028 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3048).
       0.721
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
 
     0.676
Toce_0925
Protein of unknown function DUF95 transmembrane; COGs: COG1300 membrane protein; InterPro IPR002798; KEGG: tsi:TSIB_1923 SpoIIM-like stage II sporulation protein M related; PFAM: protein of unknown function DUF95 transmembrane; SPTR: Putative uncharacterized protein; PFAM: Integral membrane protein DUF95.
  
    0.576
Toce_0916
COGs: COG1610 conserved hypothetical protein; InterPro IPR019004; KEGG: hor:Hore_12740 GatB/YqeY domain protein; PFAM: Protein of unknown function; SPTR: GatB/Yqey domain protein; PFAM: Yqey-like protein.
       0.547
Toce_0912
Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
 
     0.542
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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