STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Toce_0972InterPro IPR010897; KEGG: tit:Thit_1462 stage II sporulation protein P; PFAM: Stage II sporulation P family protein; SPTR: Stage II sporulation P family protein; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation protein P (SpoIIP); TIGRFAM: stage II sporulation protein P. (389 aa)    
Predicted Functional Partners:
Toce_0971
Protein of unknown function DUF1614; InterPro IPR011672; KEGG: tpd:Teth39_0832 hypothetical protein; PFAM: protein of unknown function DUF1614; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1614).
     0.985
Toce_0976
KEGG: tit:Thit_1458 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3189).
 
     0.945
Toce_0975
KEGG: tte:TTE1621 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3189).
 
     0.932
Toce_0973
KEGG: drm:Dred_1157 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.842
Toce_1315
KEGG: tit:Thit_1084 hypothetical protein; SPTR: Stage III sporulation protein AH.
  
   
 0.783
Toce_0974
KEGG: amt:Amet_2861 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.781
Toce_0105
SpoIID/LytB domain protein; COGs: COG2385 Sporulation protein and related protein; InterPro IPR013486:IPR013693; KEGG: aoe:Clos_2635 SpoIID/LytB domain-containing protein; PFAM: Stage II sporulation D domain protein; SPTR: SpoIID/LytB domain; TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain.
  
  
 0.764
Toce_0918
Sporulation protein YqfD; InterPro IPR010690; KEGG: tte:TTE0969 stage IV sporulation protein; PFAM: putative stage IV sporulation YqfD; SPTR: Stage IV sporulation protein; TIGRFAM: sporulation protein YqfD; PFAM: Putative stage IV sporulation protein YqfD; TIGRFAM: sporulation protein YqfD.
  
   
 0.737
Toce_0980
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
 
   
 0.728
Toce_1220
KEGG: tpd:Teth39_2126 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.673
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.