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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Toce_0977Protein of unknown function DUF512; COGs: COG1625 Fe-S oxidoreductase related to NifB/MoaA family; InterPro IPR001478:IPR007549; KEGG: cth:Cthe_1025 hypothetical protein; PFAM: protein of unknown function DUF512; PDZ/DHR/GLGF domain protein; SPTR: Putative uncharacterized protein; PFAM: PDZ domain (Also known as DHR or GLGF); Protein of unknown function (DUF512); TIGRFAM: putative FeS-containing Cyanobacterial-specific oxidoreductase. (440 aa)    
Predicted Functional Partners:
engA
Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
 
    0.962
gpsA
COGs: COG0240 Glycerol-3-phosphate dehydrogenase; InterPro IPR006168:IPR011128:IPR006109:IPR010916; KEGG: cth:Cthe_1022 glycerol-3-phosphate dehydrogenase (NAD(P)(+)); PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; SPTR: Glycerol-3-phosphate dehydrogenase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus.
     
 0.812
Toce_0976
KEGG: tit:Thit_1458 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3189).
       0.695
Toce_0974
KEGG: amt:Amet_2861 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.663
Toce_0971
Protein of unknown function DUF1614; InterPro IPR011672; KEGG: tpd:Teth39_0832 hypothetical protein; PFAM: protein of unknown function DUF1614; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1614).
       0.659
Toce_0973
KEGG: drm:Dred_1157 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.659
Toce_0980
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
       0.608
Toce_0972
InterPro IPR010897; KEGG: tit:Thit_1462 stage II sporulation protein P; PFAM: Stage II sporulation P family protein; SPTR: Stage II sporulation P family protein; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation protein P (SpoIIP); TIGRFAM: stage II sporulation protein P.
       0.593
Toce_0970
Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake.
       0.563
Toce_0975
KEGG: tte:TTE1621 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3189).
       0.555
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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