Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Toce_1319InterPro IPR014211; KEGG: dae:Dtox_2608 stage III sporulation protein AD; SPTR: Stage III sporulation protein AD; TIGRFAM: stage III sporulation protein AD; PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AD. (128 aa)    
Predicted Functional Partners:
Toce_1317
InterPro IPR014245; KEGG: amt:Amet_2497 sporulation stage III, protein AF; PFAM: Sporulation stage III protein AF; SPTR: Sporulation stage III, protein AF; TIGRFAM: stage III sporulation protein AF; PFAM: Stage III sporulation protein AF (Spore_III_AF); TIGRFAM: stage III sporulation protein AF.
 
  
 0.997
Toce_1318
InterPro IPR014194; KEGG: dae:Dtox_2607 stage III sporulation protein AE; PFAM: Sporulation stage III protein AE; SPTR: Stage III sporulation protein AE; TIGRFAM: stage III sporulation protein AE; PFAM: Stage III sporulation protein AE (spore_III_AE); TIGRFAM: stage III sporulation protein AE.
 
  
 0.995
Toce_1320
Stage III sporulation protein AC; InterPro IPR009570:IPR005829; KEGG: amt:Amet_2494 stage III sporulation AC family protein; SPTR: Stage III sporulation AC family protein; TIGRFAM: stage III sporulation protein AC; PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AC.
 
  
 0.994
Toce_1321
InterPro IPR014198; KEGG: drm:Dred_1057 stage III sporulation protein SpoAB; PFAM: Sporulation stage III protein AB; SPTR: Stage III sporulation protein AB; TIGRFAM: stage III sporulation protein AB; PFAM: Stage III sporulation protein AB (spore_III_AB); TIGRFAM: stage III sporulation protein AB.
 
  
 0.986
Toce_1322
Stage III sporulation protein AA; COGs: COG3854 conserved hypothetical protein; InterPro IPR014217:IPR003593; KEGG: tpd:Teth39_1088 AAA ATPase; SMART: AAA ATPase; SPTR: AAA ATPase; TIGRFAM: stage III sporulation protein AA; TIGRFAM: stage III sporulation protein AA.
 
  
 0.986
Toce_1316
KEGG: tit:Thit_1083 stage III sporulation protein AG; SPTR: Stage III sporulation protein AG; TIGRFAM: stage III sporulation protein AG.
 
  
 0.982
Toce_1315
KEGG: tit:Thit_1084 hypothetical protein; SPTR: Stage III sporulation protein AH.
 
  
 0.974
Toce_0980
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.937
Toce_0917
KEGG: dae:Dtox_3072 sporulation protein YqfC; SPTR: Sporulation protein YqfC; PFAM: YabP family; TIGRFAM: sporulation protein YqfC.
  
  
 0.870
Toce_1272
Stage II sporulation protein M; InterPro IPR014196:IPR002798; KEGG: aoe:Clos_1594 sporulation stage II protein M; PFAM: protein of unknown function DUF95 transmembrane; SPTR: Sporulation stage II protein M; TIGRFAM: stage II sporulation protein M; PFAM: Integral membrane protein DUF95; TIGRFAM: stage II sporulation protein M.
  
  
 0.855
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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