Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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Toce_1325Peptidase M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587:IPR000994; KEGG: drm:Dred_1051 peptidase M24; PFAM: peptidase M24; creatinase; SPTR: Peptidase M24; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain. (356 aa)    
Predicted Functional Partners:
aroK
3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the shikimate kinase family.
 
  
 0.936
Toce_1330
Late competence development protein ComFB; InterPro IPR019657; KEGG: cth:Cthe_0851 hypothetical protein; PFAM: Late competence development protein ComFB; SPTR: Putative uncharacterized protein; PFAM: Late competence development protein ComFB.
       0.800
Toce_1329
COGs: COG4972 Tfp pilus assembly protein ATPase PilM; InterPro IPR005883:IPR003494; KEGG: mxa:MXAN_5776 type IV pilus biogenesis protein PilM; PFAM: cell division protein FtsA; SPTR: Type IV pilus biogenesis protein PilM; TIGRFAM: type IV pilus assembly protein PilM; PFAM: Competence protein A; Cell division protein FtsA; TIGRFAM: type IV pilus assembly protein PilM.
       0.791
efp
Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 
 0.788
Toce_1327
KEGG: tpd:Teth39_1079 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Pilus assembly protein, PilO.
       0.785
Toce_1328
InterPro IPR007813; KEGG: mta:Moth_1544 fimbrial assembly; PFAM: Fimbrial assembly family protein; SPTR: Fimbrial assembly; PFAM: Fimbrial assembly protein (PilN).
       0.783
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
   0.745
Toce_1333
InterPro IPR012902; KEGG: dae:Dtox_2705 hypothetical protein; SPTR: N-terminal methylation protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
       0.728
Toce_1332
Conserved hypothetical protein; InterPro IPR012902:IPR001120; KEGG: sat:SYN_01760 hypothetical protein; SPTR: Hypothetical membrane protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
       0.721
Toce_1331
Hypothetical protein; InterPro IPR012902:IPR001120; KEGG: dae:Dtox_2703 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
       0.711
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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