Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Toce_1411Sporulation protein YtxC; InterPro IPR014199; KEGG: dae:Dtox_2403 sporulation protein YtxC; PFAM: Sporulation protein YtxC; SPTR: Putative uncharacterized protein; PFAM: YtxC-like family; TIGRFAM: putative sporulation protein YtxC. (285 aa)    
Predicted Functional Partners:
Toce_1319
InterPro IPR014211; KEGG: dae:Dtox_2608 stage III sporulation protein AD; SPTR: Stage III sporulation protein AD; TIGRFAM: stage III sporulation protein AD; PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AD.
  
     0.684
Toce_1318
InterPro IPR014194; KEGG: dae:Dtox_2607 stage III sporulation protein AE; PFAM: Sporulation stage III protein AE; SPTR: Stage III sporulation protein AE; TIGRFAM: stage III sporulation protein AE; PFAM: Stage III sporulation protein AE (spore_III_AE); TIGRFAM: stage III sporulation protein AE.
  
     0.649
Toce_2262
Sporulation protein YyaC; InterPro IPR009665:IPR005080; KEGG: gyc:GYMC61_3551 sporulation protein YyaC; PFAM: protein of unknown function DUF1256; SPTR: Hypothetical conserved protein; TIGRFAM: sporulation protein YyaC; PFAM: Protein of unknown function (DUF1256); TIGRFAM: putative sporulation protein YyaC.
  
     0.632
Toce_1914
KEGG: aoe:Clos_2274 CopG family transcriptional regulator; SPTR: Putative transcriptional regulator, CopG family.
  
     0.581
Toce_1321
InterPro IPR014198; KEGG: drm:Dred_1057 stage III sporulation protein SpoAB; PFAM: Sporulation stage III protein AB; SPTR: Stage III sporulation protein AB; TIGRFAM: stage III sporulation protein AB; PFAM: Stage III sporulation protein AB (spore_III_AB); TIGRFAM: stage III sporulation protein AB.
  
     0.558
Toce_0034
Sporulation peptidase YabG; InterPro IPR008764; KEGG: dhd:Dhaf_0082 sporulation peptidase YabG; PFAM: peptidase U57 YabG; SPTR: Sporulation peptidase YabG; TIGRFAM: sporulation peptidase YabG; PFAM: YabG peptidase U57; TIGRFAM: sporulation peptidase YabG.
  
     0.543
Toce_2121
KEGG: sth:STH3126 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.541
Toce_0899
Membrane protein of unknown function; InterPro IPR007165; KEGG: mta:Moth_0580 hypothetical protein; PFAM: membrane protein of unknown function; SPTR: Putative uncharacterized protein; PFAM: Membrane protein of unknown function.
  
    0.528
Toce_1765
COGs: COG1067 ATP-dependent protease; InterProIPR014251:IPR003959:IPR001984:IPR003593:IPR 008268; KEGG: drm:Dred_2560 ATPase central domain-containing protein; PFAM: AAA ATPase central domain protein; PRIAM: Endopeptidase La; SMART: AAA ATPase; SPTR: Endopeptidase La; TIGRFAM: ATP-dependent protease LonB; PFAM: ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease LonB; lon-related putative ATP-dependent protease.
  
    0.526
Toce_1272
Stage II sporulation protein M; InterPro IPR014196:IPR002798; KEGG: aoe:Clos_1594 sporulation stage II protein M; PFAM: protein of unknown function DUF95 transmembrane; SPTR: Sporulation stage II protein M; TIGRFAM: stage II sporulation protein M; PFAM: Integral membrane protein DUF95; TIGRFAM: stage II sporulation protein M.
  
     0.525
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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