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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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Toce_1447PTS system transcriptional activator; COGs: COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain; InterProIPR002078:IPR011608:IPR004701:IPR002178:IPR 003593:IPR003006:IPR002464; KEGG: tte:TTE0180 transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; PRD domain protein; PTS system fructose subfamily IIA component; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; SMART: AAA ATPase; SPTR: Sigma-54 interaction domain family protein; PFAM: PTS system fructose IIA component; Sigma-54 interactio [...] (986 aa)    
Predicted Functional Partners:
Toce_1856
COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR000394:IPR007046:IPR007634; KEGG: pth:PTH_2724 DNA-directed RNA polymerase specialized sigma subunit, sigma54-like protein; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor; SPTR: DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54, DNA binding domain; Sigma-54 factor, core binding domain; TIGRFAM: RNA polymeras [...]
 
 
 0.900
Toce_1444
PTS system D-arabitol-specific IIC component, Gat family (TC 4.A.5.1.2); COGs: COG3775 Phosphotransferase system galactitol-specific IIC component; InterPro IPR013853:IPR004703:IPR013014; KEGG: cbe:Cbei_2500 PTS system galactitol-specific IIC component; PFAM: PTS system Galactitol-specific IIC component; SPTR: PTS system, galactitol-specific IIC subunit; TIGRFAM: PTS system, galactitol-specific IIC subunit; PFAM: PTS system sugar-specific permease component; TIGRFAM: PTS system, galactitol-specific IIC component.
 
  
 0.821
Toce_1903
COGs: COG3715 Phosphotransferase system mannose/fructose/N-acetylgalactosamine-specific component IIC; InterPro IPR004700; KEGG: tit:Thit_0166 phosphotransferase system PTS sorbose-specific IIC subunit; PFAM: phosphotransferase system PTS sorbose-specific IIC subunit; SPTR: Phosphotransferase system PTS sorbose-specific IIC subunit; PFAM: PTS system sorbose-specific iic component.
 
  
 0.818
Toce_0264
Transcriptional antiterminator, BglG; COGs: COG3711 Transcriptional antiterminator; InterPro IPR007737:IPR011608:IPR002178:IPR013011; KEGG: cdf:CD3083 transcription antiterminator; PFAM: PRD domain protein; M trans-acting positive regulator; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase; SPTR: Putative uncharacterized protein; PFAM: HTH domain; Mga helix-turn-helix domain; PRD domain; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
 
  
0.799
Toce_1982
COGs: COG1447 Phosphotransferase system cellobiose-specific component IIA; InterPro IPR003188; KEGG: tpd:Teth39_1697 phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; SPTR: Phosphotransferase system cellobiose-specific component IIA; PFAM: PTS system, Lactose/Cellobiose specific IIA subunit.
 
  
 0.755
Toce_0054
Transcriptional antiterminator, BglG; COGs: COG3711 Transcriptional antiterminator; InterPro IPR011608:IPR002178:IPR013011; KEGG: amt:Amet_4270 transcriptional antiterminator, BglG; PFAM: PRD domain protein; PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase; SPTR: Transcriptional antiterminator, BglG; PFAM: HTH domain; Mga helix-turn-helix domain; PTS system, Lactose/Cellobiose specific IIB subunit; PRD domain; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
 
  
 0.749
Toce_1902
PTS system IID component, Man family (TC 4.A.6); COGs: COG3716 Phosphotransferase system mannose/fructose/N-acetylgalactosamine-specific component IID; InterPro IPR004704; KEGG: tpd:Teth39_2068 PTS system mannose/fructose/sorbose family IID component; PFAM: PTS system mannose/fructose/sorbose family IID component; SPTR: PTS system mannose/fructose/sorbose family IID component; PFAM: PTS system mannose/fructose/sorbose family IID component.
 
  
 0.736
Toce_1900
PTS system sorbose subfamily IIB component; COGs: COG3444 Phosphotransferase system mannose/fructose/N-acetylgalactosamine-specific component IIB; InterPro IPR004720; KEGG: tpd:Teth39_2067 PTS system sorbose subfamily IIB component; PFAM: PTS system sorbose subfamily IIB component; SPTR: PTS system sorbose subfamily IIB component; PFAM: PTS system sorbose subfamily IIB component.
 
  
 0.726
Toce_1901
COGs: COG2893 Phosphotransferase system mannose/fructose-specific component IIA; InterPro IPR004701; KEGG: tit:Thit_0165 PTS system fructose subfamily IIA component; PFAM: PTS system fructose subfamily IIA component; SPTR: PTS system fructose subfamily IIA component; PFAM: PTS system fructose IIA component; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIA component.
 
  
 0.711
Toce_0295
COGs: COG3444 Phosphotransferase system mannose/fructose/N-acetylgalactosamine-specific component IIB; InterPro IPR004720:IPR000209; KEGG: cbk:CLL_A3359 PTS system sorbose subfamily IIB component; PFAM: PTS system sorbose subfamily IIB component; PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase; SPTR: Protein-N(Pi)-phosphohistidine--sugar phosphotransferase; PFAM: PTS system sorbose subfamily IIB component; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB component.
 
  
 0.709
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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