Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Toce_1459Protein of unknown function UPF0016; COGs: COG2119 membrane protein; InterPro IPR001727; KEGG: amt:Amet_4793 hypothetical protein; PFAM: protein of unknown function UPF0016; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein family UPF0016. (91 aa)    
Predicted Functional Partners:
Toce_1458
KEGG: mfs:MFS40622_1542 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
Toce_1460
Na/Pi-cotransporter II-related protein; COGs: COG1283 Na+/phosphate symporter; InterPro IPR004633:IPR003841:IPR008170; KEGG: cdl:CDR20291_1626 putative sodium/phosphate cotransporter; PFAM: Na+/Picotransporter; PhoU family protein; SPTR: Na/Pi cotransporter family protein; TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: PhoU domain; Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter.
       0.586
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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