Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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sspIInterPro IPR017525; KEGG: tpd:Teth39_0969 small acid-soluble spore protein SspI; SPTR: Small, acid-soluble spore protein I; TIGRFAM: small, acid-soluble spore protein I; TIGRFAM: small, acid-soluble spore protein I; Belongs to the SspI family. (71 aa)    
Predicted Functional Partners:
Toce_2202
InterPro IPR008844; KEGG: tit:Thit_2221 germination protein, Ger(X)C family; PFAM: spore germination B3 GerAC family protein; SPTR: Germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family.
  
     0.575
Toce_2198
InterPro IPR018126; KEGG: tit:Thit_2217 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Small, acid-soluble spore proteins, alpha/beta type.
  
  
 0.561
Toce_1480
Export-related chaperone CsaA; COGs: COG0073 EMAP domain; InterPro IPR008231:IPR002547; KEGG: bmq:BMQ_pBM50063 export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; SPTR: Export-related chaperone CsaA; TIGRFAM: export-related chaperone CsaA; PFAM: Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; export-related chaperone CsaA.
       0.539
Toce_1579
Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
     0.480
Toce_1481
Transcriptional regulator, LysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119; KEGG: dhd:Dhaf_1115 transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: Transcriptional regulator, LysR family; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain.
       0.474
Toce_0758
Germination protein YpeB; InterPro IPR014239:IPR005075; KEGG: drm:Dred_3194 peptidase; PFAM: Propeptide PepSY amd peptidase M4; SPTR: Propeptide, PepSY amd peptidase M4; TIGRFAM: germination protein YpeB; TIGRFAM: germination protein YpeB.
  
     0.470
Toce_2204
InterPro IPR004995; KEGG: tit:Thit_2223 GerA spore germination protein; PFAM: GerA spore germination protein; SPTR: GerA spore germination protein; PFAM: Bacillus/Clostridium GerA spore germination protein.
  
    0.457
Toce_1228
Sporulation protein, YlmC/YmxH family; InterPro IPR014238; KEGG: bcq:BCQ_3589 PRC-barrel domain superfamily; SPTR: PRC-barrel domain superfamily; TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain; TIGRFAM: sporulation protein, YlmC/YmxH family.
  
     0.455
Toce_2015
COGs: COG2385 Sporulation protein and related protein; InterPro IPR014225:IPR013486:IPR013693; KEGG: tpd:Teth39_2097 SpoIID/LytB domain-containing protein; PFAM: Stage II sporulation D domain protein; SPTR: SpoIID/LytB domain; TIGRFAM: stage II sporulation protein D; SpoIID/LytB domain protein; PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain; stage II sporulation protein D.
  
     0.422
Toce_0204
InterPro IPR011642; KEGG: amt:Amet_1016 nucleoside recognition domain-containing protein; PFAM: nucleoside recognition domain protein; SPTR: Nucleoside recognition domain protein; PFAM: Nucleoside recognition.
  
     0.413
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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