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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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[Homology]
Score
Toce_1534KEGG: mch:Mchl_5728 hypothetical protein; SPTR: Methyltransferase CmuC; PFAM: Uroporphyrinogen decarboxylase (URO-D). (388 aa)    
Predicted Functional Partners:
Toce_1535
COGs: COG1962 Tetrahydromethanopterin S-methyltransferase subunit H; InterPro IPR002856; KEGG: mch:Mchl_5727 tetrahydromethanopterin S-methyltransferase subunit H; PFAM: Tetrahydromethanopterin S-methyltransferase MtrH subunit; PRIAM: Tetrahydromethanopterin S-methyltransferase; SPTR: CmuB; PFAM: Tetrahydromethanopterin S-methyltransferase MtrH subunit; TIGRFAM: N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit H.
 
   
 0.941
Toce_1533
Methyltransferase MtaA/CmuA family; COGs: COG5012 cobalamin binding protein; InterPro IPR006360:IPR000257:IPR003759:IPR006158; KEGG: mch:Mchl_5697 methyltransferase MtaA/CmuA family; PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; Uroporphyrinogen decarboxylase (URO-D); SPTR: Methyltransferase/corrinoid CmuA; TIGRFAM: methyltransferase MtaA/CmuA family; PFAM: Uroporphyrinogen decarboxylase (URO-D); B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain; methyltransferase, MtaA/CmuA family; Belongs to the uroporphyr [...]
 
  
 0.901
Toce_1536
HPP family protein; COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR007065; KEGG: drm:Dred_2943 HPP family protein+B94; PFAM: HPP family protein; SPTR: HPP family protein+B94; PFAM: HPP family.
 
     0.861
Toce_0788
KEGG: dhd:Dhaf_2572 protein of unknown function DUF1638; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1638).
 
     0.634
hemC
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
 
 0.579
Toce_1532
Hypothetical protein; KEGG: sfu:Sfum_2544 FmdB family regulatory protein; SPTR: Putative transporter; PFAM: Zinc ribbon domain.
       0.527
Toce_0708
COGs: COG0407 Uroporphyrinogen-III decarboxylase; KEGG: dae:Dtox_2801 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uroporphyrinogen decarboxylase (URO-D).
  
     0.512
hemL
Glutamate-1-semialdehyde-2,1-aminomutase; COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR005814:IPR006367:IPR004639; KEGG: tex:Teth514_0321 glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; SPTR: Glutamate-1-semialdehyde-2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; siroheme synthase; PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; siroheme synthase, N-terminal domain; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily.
  
  
 0.485
Toce_0791
KEGG: amt:Amet_2095 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uroporphyrinogen decarboxylase (URO-D).
  
     0.484
Toce_0347
S-layer domain protein; InterPro IPR001119:IPR001330; KEGG: pth:PTH_1483 hypothetical protein; PFAM: S-layer domain protein; Prenyltransferase/squalene oxidase; SPTR: Hypothetical membrane protein; PFAM: Prenyltransferase and squalene oxidase repeat; S-layer homology domain.
  
     0.480
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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