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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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Toce_1560PAS modulated sigma54 specific transcriptional regulator, Fis family; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR000014:IPR002912:IPR013767:IPR002078:IPR 002197:IPR003593; KEGG: drm:Dred_0663 putative PAS/PAC sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; amino acid-binding ACT domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; PAS domain containing protein; SPTR: Putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Bacterial regulatory protei [...] (528 aa)    
Predicted Functional Partners:
Toce_1856
COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR000394:IPR007046:IPR007634; KEGG: pth:PTH_2724 DNA-directed RNA polymerase specialized sigma subunit, sigma54-like protein; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor; SPTR: DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54, DNA binding domain; Sigma-54 factor, core binding domain; TIGRFAM: RNA polymeras [...]
 
   
 0.792
Toce_1561
KEGG: tit:Thit_2326 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.536
Toce_1562
Sodium:neurotransmitter symporter; COGs: COG0733 Na+-dependent transporter of the SNF family; InterPro IPR000175; KEGG: tit:Thit_2327 sodium:neurotransmitter symporter; PFAM: sodium:neurotransmitter symporter; SPTR: Sodium:neurotransmitter symporter; PFAM: Sodium:neurotransmitter symporter family; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
       0.516
Toce_1559
Methionine gamma-lyase; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR006237:IPR000277; KEGG: cko:CKO_04984 hypothetical protein; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; SPTR: Methionine gamma-lyase; TIGRFAM: methionine gamma-lyase; PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: methionine gamma-lyase; O-succinylhomoserine sulfhydrylase.
       0.472
Toce_1558
Putative methionine transporter, NhaC family (TC 2.A.35.1.-); COGs: COG1757 Na+/H+ antiporter; InterPro IPR018461; KEGG: nth:Nther_2679 Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC-like; SPTR: Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter family.
       0.434
Toce_1471
COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain; InterPro IPR004108:IPR017896:IPR017900; KEGG: dae:Dtox_1708 hydrogenase large subunit domain protein; PFAM: hydrogenase large subunit domain protein; SPTR: Hydrogenase large subunit domain protein; PFAM: Iron only hydrogenase large subunit, C-terminal domain; 4Fe-4S binding domain.
 
      0.416
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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