Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Toce_1576DNA methylase N-4/N-6 domain protein; COGs: COG2189 Adenine specific DNA methylase Mod; InterPro IPR002941:IPR002295:IPR002052:IPR016059; KEGG: hth:HTH_1616 adenine-specific DNA methylase; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: Adenine-specific DNA methylase; PFAM: DNA methylase. (851 aa)    
Predicted Functional Partners:
Toce_1575
InterPro IPR006935; KEGG: tal:Thal_1286 type III restriction protein res subunit; PFAM: type III restriction protein res subunit; SPTR: Type III restriction protein res subunit; PFAM: Type III restriction enzyme, res subunit.
 
   
 0.954
Toce_1948
Type III site-specific deoxyribonuclease; COGs: COG3587 Restriction endonuclease; InterPro IPR014001:IPR006935; KEGG: tex:Teth514_1827 type III restriction enzyme, res subunit; PFAM: type III restriction protein res subunit; PRIAM: Type III site-specific deoxyribonuclease; SMART: DEAD-like helicase; SPTR: Type III restriction enzyme, res subunit; PFAM: Type III restriction enzyme, res subunit.
 
  
 0.743
Toce_1574
Hypothetical protein; KEGG: tet:TTHERM_00702270 Beige/BEACH domain containing protein; SPTR: Beige/BEACH domain containing protein.
       0.642
Toce_1945
Helicase domain protein; InterPro IPR014001:IPR001650:IPR000330:IPR014021; KEGG: tex:Teth514_1830 helicase domain-containing protein; PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicase; SPTR: Helicase domain protein; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain.
 
   
 0.562
Toce_1577
KEGG: pth:PTH_2094 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.472
Toce_1578
Flagellar protein FliS; COGs: COG1516 Flagellin-specific chaperone FliS; InterPro IPR003713; KEGG: amt:Amet_0786 flagellar protein FliS; PFAM: flagellar protein FliS; SPTR: Flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS.
       0.472
Toce_1579
Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
       0.455
Toce_1580
InterPro IPR005186; KEGG: csc:Csac_1698 flagellar protein FlaG protein; PFAM: flagellar protein FlaG protein; SPTR: Flagellar protein FlaG protein; PFAM: FlaG protein.
       0.406
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.