Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
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Toce_1616InterPro IPR013751; KEGG: tte:TTE1875 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; SPTR: 3-oxoacyl-(Acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III. (515 aa)    
Predicted Functional Partners:
Toce_1615
Fatty acid synthesis plsX protein; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
 0.998
Toce_1617
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; InterPro IPR010187; KEGG: cpo:COPRO5265_0224 glycine reductase complex component B subunit gamma (selenoprotein PB gamma); SPTR: Glycine reductase complex component B subunit gamma (Selenoprotein PB gamma); TIGRFAM: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; TIGRFAM: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family.
 
     0.933
Toce_1618
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; InterPro IPR010187:IPR001986; KEGG: cpo:COPRO5265_0224 glycine reductase complex component B subunit gamma (selenoprotein PB gamma); SPTR: Glycine reductase complex component B subunit gamma (Selenoprotein PB gamma); TIGRFAM: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; PFAM: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); TIGRFAM: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family.
 
   
 0.929
Toce_1619
InterPro IPR006812; KEGG: cpo:COPRO5265_0223 glycine/sarcosine/betaine reductase complex component A1 (selenoprotein PA 1) (thioredoxinreductase complex A 1); PFAM: glycine reductase complex selenoprotein A; SPTR: Glycine/sarcosine/betaine reductase complex component A1 (Selenoprotein PA 1) (Thioredoxinreductase complex A 1); PFAM: Glycine reductase complex selenoprotein A.
 
   
 0.927
Toce_1620
InterPro IPR006812; KEGG: nth:Nther_0473 glycine/sarcosine/betaine reductase complex protein A; PFAM: glycine reductase complex selenoprotein A; SPTR: Betaine reductase; PFAM: Glycine reductase complex selenoprotein A.
 
     0.910
Toce_1621
InterPro IPR015417:IPR016585; KEGG: tte:TTE1879 GrdE proprotein; PFAM: Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits; SPTR: GrdE proprotein; PFAM: Glycine/sarcosine/betaine reductase component B subunits.
 
   
 0.907
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.839
Toce_1056
COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterPro IPR014043:IPR004410; KEGG: tte:TTE1473 acyl-carrier-protein S-malonyltransferase; PFAM: Acyl transferase; SPTR: (Acyl-carrier-protein) S-malonyltransferase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase.
  
  
 0.798
Toce_1059
3-oxoacyl-(acyl-carrier-protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
  
 0.763
Toce_1622
COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR013766:IPR017936; KEGG: tte:TTE1880 thiol-disulfide isomerase and thioredoxins; PFAM: Thioredoxin domain; SPTR: Thiol-disulfide isomerase and thioredoxins; PFAM: Thioredoxin; TIGRFAM: thioredoxin; Belongs to the thioredoxin family.
 
   
 0.756
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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