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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Toce_1680KEGG: cbf:CLI_2520 putative D-proline reductase, PrdB subunit, selenocysteine-containing; SPTR: Putative D-proline reductase, PrdB subunit, selenocysteine-containing. (83 aa)    
Predicted Functional Partners:
Toce_1681
KEGG: aoe:Clos_0030 D-proline reductase (dithiol); PRIAM: D-proline reductase (dithiol); SPTR: D-proline reductase (Dithiol); PFAM: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); TIGRFAM: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family.
     0.995
Toce_1683
D-proline reductase (dithiol); InterPro IPR015417; KEGG: cbl:CLK_3050 glycine/sarcosine/betaine reductase, component B, subunits alpha and beta; PFAM: Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits; PRIAM: D-proline reductase (dithiol); SPTR: Glycine/sarcosine/betaine reductase, component B, subunits alpha and beta; PFAM: Glycine/sarcosine/betaine reductase component B subunits.
 
     0.951
Toce_1679
D-proline reductase (dithiol); KEGG: cbf:CLI_3802 glycine/sarcosine/betaine reductase, component B, subunits alpha and beta; PRIAM: D-proline reductase (dithiol); SPTR: Glycine/sarcosine/betaine reductase, component B, subunits alpha and beta; PFAM: Glycine/sarcosine/betaine reductase component B subunits.
 
     0.928
Toce_1678
D-proline reductase (dithiol); InterPro IPR015417; KEGG: cbl:CLK_1856 PrdE protein; PFAM: Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits; PRIAM: D-proline reductase (dithiol); SPTR: D-proline reductase (Dithiol); PFAM: Glycine/sarcosine/betaine reductase component B subunits.
 
     0.925
Toce_1684
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; COGs: COG4656 NADH:ubiquinone oxidoreductase subunit RnfC; InterPro IPR011538:IPR019554; KEGG: cbl:CLK_3051 respiratory-chain NADH dehydrogenase family protein; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; SPTR: Respiratory-chain NADH dehydrogenase family protein; PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit.
 
     0.921
Toce_1675
KEGG: cbo:CBO2473 integral membrane protein; SPTR: Putative integral membrane protein; PFAM: Sulfite exporter TauE/SafE.
 
     0.809
Toce_1677
COGs: COG3938 Proline racemase; InterPro IPR008794:IPR020053; KEGG: amt:Amet_0671 proline racemase; PFAM: proline racemase; PRIAM: Proline racemase; SPTR: Proline racemase; PFAM: Proline racemase; Belongs to the proline racemase family.
 
     0.771
Toce_1682
KEGG: cbf:CLI_3801 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.714
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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