Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Toce_1707KEGG: pth:PTH_2777 hypothetical protein; SPTR: Putative uncharacterized protein. (150 aa)    
Predicted Functional Partners:
Toce_1705
Polysaccharide pyruvyl transferase CsaB; COGs: COG2327 conserved hypothetical protein; InterPro IPR019896; KEGG: drm:Dred_3108 polysaccharide pyruvyl transferase; SPTR: Polysaccharide pyruvyl transferase; TIGRFAM: polysaccharide pyruvyl transferase CsaB; PFAM: Polysaccharide pyruvyl transferase; TIGRFAM: polysaccharide pyruvyl transferase CsaB.
 
     0.901
Toce_1668
InterPro IPR012854; KEGG: dae:Dtox_4298 copper amine oxidase domain protein; PFAM: copper amine oxidase domain protein; SPTR: Copper amine oxidase domain protein; PFAM: Copper amine oxidase N-terminal domain.
  
     0.769
Toce_0439
InterPro IPR012854; KEGG: cth:Cthe_0402 copper amine oxidase-like protein; PFAM: copper amine oxidase domain protein; SPTR: Copper amine oxidase domain protein; PFAM: Copper amine oxidase N-terminal domain.
  
     0.768
Toce_2231
InterPro IPR012854; KEGG: dae:Dtox_3690 copper amine oxidase domain protein; PFAM: copper amine oxidase domain protein; SPTR: Copper amine oxidase domain protein; PFAM: Copper amine oxidase N-terminal domain.
  
     0.767
Toce_0630
InterPro IPR012854; KEGG: tit:Thit_0521 copper amine oxidase domain protein; PFAM: copper amine oxidase domain protein; SPTR: Copper amine oxidase domain protein; PFAM: Copper amine oxidase N-terminal domain.
  
     0.766
Toce_0497
S-layer domain protein; InterPro IPR001119; KEGG: tex:Teth514_1781 alpha amylase, catalytic region; PFAM: S-layer domain protein; SPTR: Alpha amylase, catalytic region; PFAM: S-layer homology domain.
  
     0.761
Toce_0197
S-layer domain protein; InterPro IPR001119; KEGG: tit:Thit_0105 S-layer domain protein; PFAM: S-layer domain protein; SPTR: S-layer domain protein; PFAM: S-layer homology domain.
  
     0.760
Toce_2175
S-layer domain protein; InterPro IPR001119; KEGG: csc:Csac_2451 S-layer domain-containing protein; PFAM: S-layer domain protein; SPTR: S-layer domain protein; PFAM: S-layer homology domain.
 
     0.757
Toce_2232
InterPro IPR018604; KEGG: tit:Thit_2308 protein of unknown function YycH; PFAM: Protein of unknown function YycH; SPTR: Putative uncharacterized protein; PFAM: YycH protein.
  
     0.754
Toce_0496
S-layer domain protein; InterPro IPR001119; KEGG: gym:GYMC10_1663 S-layer domain protein; PFAM: S-layer domain protein; SPTR: S-layer associated multidomain endoglucanase; PFAM: S-layer homology domain.
  
     0.753
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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