Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Toce_1886Hypothetical protein; InterPro IPR018247; KEGG: mno:Mnod_4422 carbamoyl-phosphate synthase, large subunit; SPTR: Type I restriction-modification system, M subunit. (308 aa)    
Predicted Functional Partners:
Toce_1887
FlhB domain protein; COGs: COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB; InterPro IPR006135:IPR004683; KEGG: mta:Moth_1003 flagellar biosynthesis; PFAM: type III secretion exporter; SPTR: Flagellar biosynthesis; TIGRFAM: FlhB domain protein; PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flhB C-terminus-related protein.
       0.682
Toce_1888
S-layer domain protein; InterPro IPR005075:IPR001119; KEGG: dsy:DSY4050 hypothetical protein; PFAM: S-layer domain protein; Propeptide PepSY amd peptidase M4; SPTR: Putative uncharacterized protein; PFAM: S-layer homology domain; Peptidase propeptide and YPEB domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type.
       0.430
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.