Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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co-expression
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gene neighborhood
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[Homology]
Score
Toce_1907KEGG: tit:Thit_0882 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Coenzyme PQQ synthesis protein D (PqqD). (115 aa)    
Predicted Functional Partners:
Toce_1908
Oligopeptide transporter, OPT family; COGs: COG1297 membrane protein; InterPro IPR004813:IPR004814; KEGG: tit:Thit_0881 oligopeptide transporter, OPT family; PFAM: Oligopeptide transporter OPT superfamily protein; SPTR: Oligopeptide transporter, OPT family; TIGRFAM: oligopeptide transporter, OPT family; oligopeptide transporters, OPT superfamily; PFAM: OPT oligopeptide transporter protein; TIGRFAM: oligopeptide transporters, OPT superfamily; putative oligopeptide transporter, OPT family.
 
     0.924
Toce_1906
PTS system transcriptional activator; COGs: COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain; InterProIPR003593:IPR002078:IPR002464:IPR011608:IPR 004701; KEGG: cbk:CLL_A3361 transcriptional regulatory protein LevR; PFAM: sigma-54 factor interaction domain-containing protein; PRD domain protein; PTS system fructose subfamily IIA component; SMART: AAA ATPase; SPTR: PTS system transcriptional activator; PFAM: PTS system fructose IIA component; Sigma-54 interaction domain; PRD domain.
       0.437
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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