Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Toce_1974Regulatory protein ArsR; InterPro IPR001845; KEGG: mta:Moth_2209 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family. (122 aa)    
Predicted Functional Partners:
Toce_1975
Transcriptional regulator, ArsR family; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845; KEGG: fno:Fnod_1486 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Regulatory protein ArsR; PFAM: Bacterial regulatory protein, arsR family.
 
  
 0.880
Toce_1973
Arsenical-resistance protein; COGs: COG0798 Arsenite efflux pump ACR3 and related permease; InterPro IPR004706:IPR002657; KEGG: cth:Cthe_1111 bile acid:sodium symporter; PFAM: Bile acid:sodium symporter; SPTR: Arsenical-resistance protein; TIGRFAM: arsenical-resistance protein; PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein.
  
  
 0.818
Toce_2093
InterPro IPR001845; KEGG: bwe:BcerKBAB4_2205 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Putative transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family.
 
  
 0.762
Toce_0575
Protein-tyrosine phosphatase, low molecular weight; COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: sul:SYO3AOP1_0933 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Protein ArsC; PFAM: Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: arsenate reductase (thioredoxin).
  
  
 0.755
Toce_1976
Permease; COGs: COG0701 permease; InterPro IPR005524; KEGG: fno:Fnod_1485 permease; PFAM: permease; SPTR: Permease; PFAM: Predicted permease.
  
  
 0.539
Toce_1977
InterPro IPR005243; KEGG: fno:Fnod_1484 redox-active disulfide protein 2; SPTR: Redox-active disulfide protein 2; TIGRFAM: redox-active disulfide protein 2; TIGRFAM: small redox-active disulfide protein 2.
     
 0.405
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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