Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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co-expression
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gene neighborhood
gene co-occurrence
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Score
Toce_1975Transcriptional regulator, ArsR family; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845; KEGG: fno:Fnod_1486 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Regulatory protein ArsR; PFAM: Bacterial regulatory protein, arsR family. (110 aa)    
Predicted Functional Partners:
Toce_1974
Regulatory protein ArsR; InterPro IPR001845; KEGG: mta:Moth_2209 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family.
 
  
 0.880
Toce_1976
Permease; COGs: COG0701 permease; InterPro IPR005524; KEGG: fno:Fnod_1485 permease; PFAM: permease; SPTR: Permease; PFAM: Predicted permease.
 
  
 0.839
Toce_1449
Transcriptional regulator, ArsR family; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845:IPR018334; KEGG: tex:Teth514_1161 regulatory protein, ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Regulatory protein, ArsR; PFAM: Bacterial regulatory protein, arsR family.
  
     0.762
Toce_1727
Heavy metal translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; Contains selenocysteine; InterProIPR006404:IPR006416:IPR001757:IPR006121:IPR 008250:IPR005834:IPR001366:IPR018303; KEGG: gsu:GSU2147 cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; manual [...]
  
  
 0.644
Toce_1977
InterPro IPR005243; KEGG: fno:Fnod_1484 redox-active disulfide protein 2; SPTR: Redox-active disulfide protein 2; TIGRFAM: redox-active disulfide protein 2; TIGRFAM: small redox-active disulfide protein 2.
     
 0.555
Toce_1627
Transcriptional regulator, ArsR family; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845; KEGG: pth:PTH_1500 transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Predicted transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family.
  
   
 0.528
Toce_1973
Arsenical-resistance protein; COGs: COG0798 Arsenite efflux pump ACR3 and related permease; InterPro IPR004706:IPR002657; KEGG: cth:Cthe_1111 bile acid:sodium symporter; PFAM: Bile acid:sodium symporter; SPTR: Arsenical-resistance protein; TIGRFAM: arsenical-resistance protein; PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein.
  
  
 0.495
Toce_0722
Copper-translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterProIPR006121:IPR006403:IPR006416:IPR001757:IPR 018303:IPR017969:IPR001756:IPR001877:IPR008250:IPR005834; KEGG: tte:TTE2463 cation transport ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Copper-translocating P-type ATPase; TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Heavy-metal-as [...]
  
  
 0.479
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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