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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Toce_1985InterPro IPR002355; KEGG: tit:Thit_0584 hypothetical protein; SPTR: Putative uncharacterized protein. (74 aa)    
Predicted Functional Partners:
Toce_1986
Transcriptional antiterminator, BglG family; COGs: COG3711 Transcriptional antiterminator; InterPro IPR011608:IPR003501:IPR002178:IPR013011; KEGG: tex:Teth514_0531 transcriptional antiterminator, BglG; PFAM: PRD domain protein; phosphotransferase system lactose/cellobiose-specific IIB subunit; PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase; SPTR: PTS modulated transcriptional regulator, MtlR family; PFAM: Mga helix-turn-helix domain; HTH domain; PTS system, Lactose/Cellobiose specific IIB subunit; PRD domain; Phosphoenolpyruvate-dependent sugar phosphotransferase syste [...]
       0.777
Toce_1984
COGs: COG1440 Phosphotransferase system cellobiose-specific component IIB; InterPro IPR003501:IPR013012; KEGG: tit:Thit_0585 phosphotransferase system lactose/cellobiose-specific IIB subunit; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; SPTR: Phosphotransferase system, lactose/cellobiose-specific IIB subunit; PFAM: PTS system, Lactose/Cellobiose specific IIB subunit.
       0.639
Toce_1983
PTS system, lactose/cellobiose family IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
       0.627
Toce_1982
COGs: COG1447 Phosphotransferase system cellobiose-specific component IIA; InterPro IPR003188; KEGG: tpd:Teth39_1697 phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; SPTR: Phosphotransferase system cellobiose-specific component IIA; PFAM: PTS system, Lactose/Cellobiose specific IIA subunit.
       0.589
Toce_1987
tRNA (adenine-58-N(1)-) methyltransferase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.
       0.441
mobA
Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.
       0.412
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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