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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Toce_2159GCN5-related N-acetyltransferase; COGs: COG0456 Acetyltransferase; InterPro IPR022272:IPR000182; KEGG: csc:Csac_2705 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family. (203 aa)    
Predicted Functional Partners:
Toce_2160
COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR003811:IPR002509; KEGG: bpf:BpOF4_11995 chitooligosaccharide deacetylase; PFAM: polysaccharide deacetylase; protein of unknown function DUF205; SPTR: Chitooligosaccharide deacetylase; PFAM: Domain of unknown function (DUF205); Polysaccharide deacetylase; TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB.
  
  
 0.791
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.566
Toce_2161
DNA polymerase beta domain protein region; InterPro IPR002934; KEGG: chy:CHY_2181 nucleotidyltransferase domain-containing protein; PFAM: DNA polymerase beta domain protein region; SPTR: Putative nucleotidyltransferase domain protein; PFAM: Nucleotidyltransferase domain.
     
 0.518
Toce_1588
COGs: COG0438 Glycosyltransferase; InterProIPR001296:IPR013216:IPR001173:IPR019734:IPR 013026:IPR000276; KEGG: tnp:Tnap_0554 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; Methyltransferase type 11; glycosyl transferase group 1; SMART: Tetratricopeptide repeat; SPTR: Glycosyl transferase family 2; PFAM: Methyltransferase domain; Glycosyl transferases group 1; Glycosyl transferase family 2.
  
 
 0.493
Toce_2162
Protein of unknown function DUF86; COGs: COG2445 conserved hypothetical protein; InterPro IPR008201; KEGG: ate:Athe_0224 protein of unknown function DUF86; PFAM: protein of unknown function DUF86; SPTR: Putative toxin-antitoxin system, antitoxin component; PFAM: Protein of unknown function DUF86.
       0.491
Toce_1893
Peptidase M22 glycoprotease; COGs: COG1214 Inactive homolog of metal-dependent protease putative molecular chaperone; InterPro IPR000905; KEGG: cth:Cthe_1775 peptidase M22, glycoprotease; PFAM: peptidase M22 glycoprotease; SPTR: Putative uncharacterized protein; PFAM: Glycoprotease family.
  
 
 0.402
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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