STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG78754.1KEGG: tth:TTC0140 hypothetical protein. (108 aa)    
Predicted Functional Partners:
EEG78753.1
PFAM: protein of unknown function DUF897; KEGG: cau:Caur_1784 protein of unknown function DUF897.
 
 
 
 0.970
EEG76126.1
TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: tex:Teth514_0555 ammonium transporter.
  
 0.942
EEG78042.1
Signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pth:PTH_1422 hypothetical membrane protein.
  
 0.797
EEG76847.1
Signal transduction histidine kinase, nitrogen specific, NtrB; KEGG: pth:PTH_1422 hypothetical membrane protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein.
  
 0.797
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
    
 
 0.792
EEG78743.1
PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: pth:PTH_1778 membrane signaling protein.
  
 0.689
EEG77442.1
KEGG: afw:Anae109_3110 hypothetical protein.
  
     0.672
EEG78750.1
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: dau:Daud_1962 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
 
     0.652
EEG77325.1
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: swo:Swol_1054 signal transduction histidine kinase nitrogen specific-like protein.
   
 0.648
EEG76607.1
Signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: drm:Dred_1745 signal transduction histidine kinase, nitrogen specific, NtrB.
   
 0.648
Your Current Organism:
Dethiobacter alkaliphilus
NCBI taxonomy Id: 555088
Other names: D. alkaliphilus AHT 1, Dethiobacter alkaliphilus AHT 1, Dethiobacter alkaliphilus DSM 19026, Dethiobacter alkaliphilus str. AHT 1, Dethiobacter alkaliphilus strain AHT 1
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