STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG78758.1TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: fre:Franean1_2138 sortase family protein. (188 aa)    
Predicted Functional Partners:
EEG78757.1
KEGG: sfu:Sfum_0396 hydrolase (HAD superfamily).
     
 0.780
EEG78756.1
PFAM: ADP-ribosylation/Crystallin J1; KEGG: dsy:DSY1178 hypothetical protein.
       0.693
EEG78085.1
TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: cpr:CPR_2301 sortase family protein.
  
     0.575
EEG78755.1
PFAM: Bile acid:sodium symporter; KEGG: amt:Amet_1885 bile acid:sodium symporter.
       0.511
EEG77534.1
TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: Fibronectin type III domain protein; cell envelope-related transcriptional attenuator; KEGG: amt:Amet_0217 cell envelope-related transcriptional attenuator.
  
   
 0.469
EEG78436.1
Hypothetical protein.
    
 0.454
EEG78084.1
TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: spl:Spea_2750 hypothetical protein.
    
 0.454
birA
biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
      
 0.431
EEG77512.1
TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: dau:Daud_2095 cell envelope-related transcriptional attenuator.
  
   
 0.418
EEG77509.1
TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: drm:Dred_3112 cell envelope-related transcriptional attenuator.
  
   
 0.417
Your Current Organism:
Dethiobacter alkaliphilus
NCBI taxonomy Id: 555088
Other names: D. alkaliphilus AHT 1, Dethiobacter alkaliphilus AHT 1, Dethiobacter alkaliphilus DSM 19026, Dethiobacter alkaliphilus str. AHT 1, Dethiobacter alkaliphilus strain AHT 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.