STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG78565.1Hypothetical protein. (121 aa)    
Predicted Functional Partners:
EEG78566.1
PFAM: coenzyme A transferase; KEGG: vei:Veis_3616 putative CoA transferase, subunit B.
       0.746
EEG78567.1
KEGG: rpa:RPA1029 possible CoA transferase, subunit A.
       0.746
EEG78568.1
KEGG: mes:Meso_2969 coenzyme A transferase.
       0.645
EEG78569.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: swo:Swol_2046 hypothetical protein.
       0.445
EEG78564.1
TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: oih:OB2540 sodium-dependent transporter.
       0.430
ade
KEGG: mta:Moth_0463 adenine deaminase; TIGRFAM: adenine deaminase; PFAM: amidohydrolase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
       0.423
EEG78571.1
PFAM: protein of unknown function UPF0047; KEGG: dau:Daud_0831 protein of unknown function UPF0047.
       0.423
Your Current Organism:
Dethiobacter alkaliphilus
NCBI taxonomy Id: 555088
Other names: D. alkaliphilus AHT 1, Dethiobacter alkaliphilus AHT 1, Dethiobacter alkaliphilus DSM 19026, Dethiobacter alkaliphilus str. AHT 1, Dethiobacter alkaliphilus strain AHT 1
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