STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG78567.1KEGG: rpa:RPA1029 possible CoA transferase, subunit A. (161 aa)    
Predicted Functional Partners:
EEG78566.1
PFAM: coenzyme A transferase; KEGG: vei:Veis_3616 putative CoA transferase, subunit B.
 
 0.998
EEG76255.1
PFAM: coenzyme A transferase; KEGG: pth:PTH_2042 acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.
 
 0.992
EEG78568.1
KEGG: mes:Meso_2969 coenzyme A transferase.
 
     0.921
EEG76163.1
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: chy:CHY_1609 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein.
  
 
 0.776
EEG78565.1
Hypothetical protein.
       0.746
EEG76384.1
PFAM: alpha/beta hydrolase fold; KEGG: dsy:DSY2637 hypothetical protein.
 
 
 0.587
EEG78410.1
PFAM: protein of unknown function DUF849; KEGG: sth:STH64 hypothetical protein.
    
 0.504
buk
TIGRFAM: butyrate kinase; PFAM: acetate and butyrate kinase; KEGG: amt:Amet_4431 butyrate kinase; Belongs to the acetokinase family.
     
 0.504
EEG77042.1
PFAM: phosphate acetyl/butaryl transferase; KEGG: tte:TTE2204 phosphate butyryltransferase.
   
 
 0.497
EEG78522.1
PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: pth:PTH_1366 methylmalonyl-CoA decarboxylase, gamma subunit.
  
  
 0.493
Your Current Organism:
Dethiobacter alkaliphilus
NCBI taxonomy Id: 555088
Other names: D. alkaliphilus AHT 1, Dethiobacter alkaliphilus AHT 1, Dethiobacter alkaliphilus DSM 19026, Dethiobacter alkaliphilus str. AHT 1, Dethiobacter alkaliphilus strain AHT 1
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