STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG78573.1PFAM: NADPH-dependent FMN reductase; KEGG: chy:CHY_1344 putative FMN reductase. (276 aa)    
Predicted Functional Partners:
EEG77983.1
PFAM: NADPH-dependent FMN reductase; KEGG: glo:Glov_3724 NADPH-dependent FMN reductase.
  
     0.771
EEG78572.1
Hypothetical protein.
       0.554
EEG76297.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.524
EEG78855.1
KEGG: ppd:Ppro_1930 SAM-dependent methyltransferases.
  
  0.519
EEG78574.1
Diguanylate cyclase and metal dependent phosphohydrolase; KEGG: pth:PTH_2004 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region.
       0.505
EEG78569.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: swo:Swol_2046 hypothetical protein.
  
 
  0.492
EEG76231.1
KEGG: cth:Cthe_3040 hypothetical protein.
   
  
 0.482
EEG76602.1
PFAM: Peptidoglycan-binding LysM; KEGG: dau:Daud_0053 peptidoglycan-binding LysM.
   
  
 0.466
EEG78571.1
PFAM: protein of unknown function UPF0047; KEGG: dau:Daud_0831 protein of unknown function UPF0047.
       0.438
EEG78881.1
PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: cth:Cthe_1205 putative serine protein kinase, PrkA.
   
    0.435
Your Current Organism:
Dethiobacter alkaliphilus
NCBI taxonomy Id: 555088
Other names: D. alkaliphilus AHT 1, Dethiobacter alkaliphilus AHT 1, Dethiobacter alkaliphilus DSM 19026, Dethiobacter alkaliphilus str. AHT 1, Dethiobacter alkaliphilus strain AHT 1
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