STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG78468.1PFAM: Sterol-binding domain protein; KEGG: xtr:493329 MGC89719 protein Pfam: KR adh_short NAD_binding_4 SCP2. (103 aa)    
Predicted Functional Partners:
EEG77121.1
Alpha-methylacyl-CoA racemase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: afw:Anae109_1532 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
 
     0.539
EEG78469.1
Nitrite reductase (cytochrome; PFAM: cytochrome c552; KEGG: chy:CHY_0243 cytochrome c552; Belongs to the cytochrome c-552 family.
       0.480
EEG76010.1
PFAM: beta-lactamase domain protein; KEGG: chy:CHY_0600 metallo-beta-lactamase family protein.
  
     0.478
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
  
  
  0.416
Your Current Organism:
Dethiobacter alkaliphilus
NCBI taxonomy Id: 555088
Other names: D. alkaliphilus AHT 1, Dethiobacter alkaliphilus AHT 1, Dethiobacter alkaliphilus DSM 19026, Dethiobacter alkaliphilus str. AHT 1, Dethiobacter alkaliphilus strain AHT 1
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