STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG77619.1PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amt:Amet_2036 binding-protein-dependent transport systems inner membrane component. (331 aa)    
Predicted Functional Partners:
EEG77618.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amt:Amet_2037 binding-protein-dependent transport systems inner membrane component.
 
 0.984
EEG77617.1
KEGG: amt:Amet_2038 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 0.978
EEG77620.1
PFAM: extracellular solute-binding protein family 5; KEGG: amt:Amet_2035 extracellular solute-binding protein, family 5.
 0.978
EEG77616.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: amt:Amet_2039 ABC transporter related.
 
 
 0.967
EEG77047.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bld:BLi01228 AppC.
 
 0.929
EEG76739.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gur:Gura_2052 binding-protein-dependent transport systems inner membrane component.
 
 0.924
EEG77274.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amt:Amet_2907 binding-protein-dependent transport systems inner membrane component.
 
 0.920
EEG76980.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0030 oligopeptide ABC transporter (permease).
 
 0.919
EEG77049.1
PFAM: extracellular solute-binding protein family 5; KEGG: pca:Pcar_1870 dipeptide transport protein.
 0.899
EEG77272.1
4-phytase; PFAM: extracellular solute-binding protein family 5; KEGG: ttj:TTHA1336 peptide ABC transporter oligopeptide-binding protein.
 0.898
Your Current Organism:
Dethiobacter alkaliphilus
NCBI taxonomy Id: 555088
Other names: D. alkaliphilus AHT 1, Dethiobacter alkaliphilus AHT 1, Dethiobacter alkaliphilus DSM 19026, Dethiobacter alkaliphilus str. AHT 1, Dethiobacter alkaliphilus strain AHT 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.