STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG77638.1PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: aoe:Clos_2717 cytochrome c biogenesis protein transmembrane region. (228 aa)    
Predicted Functional Partners:
EEG77637.1
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: oih:OB0852 cytochrome c biogenesis.
  
 0.968
EEG77750.1
PFAM: ResB family protein; KEGG: hmo:HM1_1961 cytochrome c biogenesis protein ccsb, putative.
 
  
 0.733
EEG77639.1
Magnesium transporter; Acts as a magnesium transporter.
   
   0.643
EEG77747.1
TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: gme:Gmet_3232 cytochrome c assembly protein.
 
  
 0.599
EEG77749.1
TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: mta:Moth_2200 cytochrome c assembly protein.
 
  
 0.599
EEG77744.1
TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: hmo:HM1_1966 uroporphyrinogen III synthase/methyltransferase.
  
    0.575
EEG77640.1
PFAM: protein of unknown function DUF156; KEGG: dsy:DSY2430 hypothetical protein.
       0.564
EEG79016.1
PFAM: zinc/iron permease; KEGG: amt:Amet_4265 zinc/iron permease.
   
    0.556
EEG77082.1
PFAM: zinc/iron permease; KEGG: amt:Amet_4265 zinc/iron permease.
   
    0.556
EEG77753.1
PFAM: cytochrome c assembly protein; KEGG: rrs:RoseRS_3568 cytochrome c assembly protein.
  
  
 0.526
Your Current Organism:
Dethiobacter alkaliphilus
NCBI taxonomy Id: 555088
Other names: D. alkaliphilus AHT 1, Dethiobacter alkaliphilus AHT 1, Dethiobacter alkaliphilus DSM 19026, Dethiobacter alkaliphilus str. AHT 1, Dethiobacter alkaliphilus strain AHT 1
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