STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG77715.1PFAM: multihaem cytochrome; KEGG: chy:CHY_0644 putative cytochrome c. (598 aa)    
Predicted Functional Partners:
EEG78069.1
PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; KEGG: cth:Cthe_1961 nucleotidyl transferase.
     
 0.603
EEG77511.1
PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: cth:Cthe_1079 nucleotidyl transferase.
     
 0.603
EEG77294.1
Sucrose-phosphate synthase; KEGG: noc:Noc_3069 HAD-superfamily hydrolase subfamily IIB; TIGRFAM: Sucrose-phosphate phosphatase subfamily; HAD-superfamily hydrolase, subfamily IIB; sucrose-phosphate synthase; PFAM: glycosyl transferase group 1; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3.
    
  0.444
Your Current Organism:
Dethiobacter alkaliphilus
NCBI taxonomy Id: 555088
Other names: D. alkaliphilus AHT 1, Dethiobacter alkaliphilus AHT 1, Dethiobacter alkaliphilus DSM 19026, Dethiobacter alkaliphilus str. AHT 1, Dethiobacter alkaliphilus strain AHT 1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.