STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG77182.1Hypothetical protein; KEGG: cal:CaO19.7802 similar to S. cerevisiae CHO2 (YGR157W) phosphatidylethanolamine N-methyltransferase (phosphatidylcholine biosynthesis). (221 aa)    
Predicted Functional Partners:
EEG77181.1
PFAM: sodium/hydrogen exchanger; KEGG: dau:Daud_0861 sodium/hydrogen exchanger.
       0.513
EEG77179.1
PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: dsy:DSY1755 potassium transporter peripheral membrane component.
       0.476
EEG77180.1
Hypothetical protein; KEGG: sat:SYN_02618 potassium transporter peripheral membrane component.
       0.476
EEG77183.1
KEGG: dau:Daud_1484 hypothetical protein.
       0.475
Your Current Organism:
Dethiobacter alkaliphilus
NCBI taxonomy Id: 555088
Other names: D. alkaliphilus AHT 1, Dethiobacter alkaliphilus AHT 1, Dethiobacter alkaliphilus DSM 19026, Dethiobacter alkaliphilus str. AHT 1, Dethiobacter alkaliphilus strain AHT 1
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