STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG76834.1PFAM: outer membrane efflux protein; KEGG: dau:Daud_2120 outer membrane protein-like protein. (362 aa)    
Predicted Functional Partners:
EEG76832.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: drm:Dred_2949 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.990
EEG76833.1
PFAM: acriflavin resistance protein; KEGG: mta:Moth_2369 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.951
EEG77999.1
KEGG: amt:Amet_3080 secretion protein HlyD family protein.
  
 0.915
EEG76033.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cau:Caur_0998 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.864
EEG77606.1
KEGG: mta:Moth_0857 hypothetical protein.
  
 0.784
EEG77001.1
PFAM: acriflavin resistance protein; KEGG: aoe:Clos_2611 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.778
EEG76835.1
PFAM: regulatory protein TetR; KEGG: mta:Moth_2368 transcriptional regulator, TetR family.
     
 0.775
EEG76836.1
Hypothetical protein; KEGG: gtn:GTNG_1445 transcriptional regulator (TetR/AcrR family).
     
 0.774
EEG78911.1
PFAM: acriflavin resistance protein; KEGG: amt:Amet_0188 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.731
EEG76031.1
PFAM: protein of unknown function DUF214; KEGG: pla:Plav_1100 ABC transporter related.
 
 
 0.656
Your Current Organism:
Dethiobacter alkaliphilus
NCBI taxonomy Id: 555088
Other names: D. alkaliphilus AHT 1, Dethiobacter alkaliphilus AHT 1, Dethiobacter alkaliphilus DSM 19026, Dethiobacter alkaliphilus str. AHT 1, Dethiobacter alkaliphilus strain AHT 1
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