STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG76633.1PFAM: RNA binding S1 domain protein; KEGG: drm:Dred_0122 RNA binding S1 domain protein. (133 aa)    
Predicted Functional Partners:
EEG78808.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cth:Cthe_3120 pyruvate flavodoxin/ferredoxin oxidoreductase-like protein.
    
  0.845
EEG77139.1
TIGRFAM: pyruvate kinase; PFAM: HpcH/HpaI aldolase; PEP-utilising protein mobile region; Pyruvate kinase barrel; Pyruvate kinase alpha/beta; KEGG: pth:PTH_2214 pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.805
EEG77850.1
PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: mbu:Mbur_0890 pyruvate flavodoxin/ferredoxin oxidoreductase-like protein.
    
  0.626
EEG76632.1
PFAM: Septum formation initiator; KEGG: hmo:HM1_0712 septum formation initiator family protein.
  
    0.615
EEG76634.1
PFAM: Ppx/GppA phosphatase; KEGG: pth:PTH_0190 hypothetical protein.
       0.604
EEG77293.1
PFAM: PfkB domain protein; KEGG: noc:Noc_3070 PfkB family of carbohydrate kinase.
  
  
  0.591
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: amt:Amet_1375 glucose-6-phosphate isomerase; Belongs to the GPI family.
    
  0.563
EEG76631.1
KEGG: pth:PTH_0125 hypothetical membrane protein.
     
 0.554
EEG77590.1
KEGG: hmo:HM1_1076 fructose-1,6-bisphosphate aldolase, class II; TIGRFAM: ketose-bisphosphate aldolase; fructose-1,6-bisphosphate aldolase, class II; PFAM: ketose-bisphosphate aldolase class-II.
   
 
  0.544
EEG77161.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
    
  0.540
Your Current Organism:
Dethiobacter alkaliphilus
NCBI taxonomy Id: 555088
Other names: D. alkaliphilus AHT 1, Dethiobacter alkaliphilus AHT 1, Dethiobacter alkaliphilus DSM 19026, Dethiobacter alkaliphilus str. AHT 1, Dethiobacter alkaliphilus strain AHT 1
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