STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR999_PMT22422Usher syndrome type-1G protein. (301 aa)    
Predicted Functional Partners:
DR999_PMT23385
Nucleotide pyrophosphohydrolase.
    
 0.842
DR999_PMT10047
Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha.
    
 0.842
DR999_PMT23316
UDP-glucuronosyltransferase 1-9-like.
    
  0.814
DR999_PMT20971
POU domain protein ZP-23.
    
 
0.795
DR999_PMT10053
Ephexin-1.
    
 0.764
DR999_PMT15743
NK-tumor recognition protein.
    
0.763
DR999_PMT04771
ADP-ribosylation factor-like protein 8B.
   
  0.760
DR999_PMT04731
Partitioning defective 3-like protein.
   
  0.760
DR999_PMT15083
Junctional adhesion molecule C.
    
 0.759
DR999_PMT19940
Butyrophilin subfamily 1 member A1-like.
    
 
0.744
Your Current Organism:
Platysternon megacephalum
NCBI taxonomy Id: 55544
Other names: P. megacephalum, Platysternon macrocephalus, big-headed turtle
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