STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR999_PMT19452E3 ubiquitin-protein ligase TRIM41. (228 aa)    
Predicted Functional Partners:
DR999_PMT12673
Putative helicase with zinc finger domain; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.954
DR999_PMT17754
Techylectin-5A-like.
      
 0.582
DR999_PMT02462
Solute carrier family 2, facilitated glucose transporter member 5.
      
 0.548
DR999_PMT04275
ERC protein 2-like isoform 4.
      
 0.540
DR999_PMT09990
Carcinoembryonic antigen-related cell adhesion molecule 5.
      
 0.537
DR999_PMT05201
NEDD8-activating enzyme E1 catalytic subunit.
     
 0.510
DR999_PMT04815
Pyruvate dehydrogenase protein X component, mitochondrial.
     
 0.510
DR999_PMT00770
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...]
     
 0.510
DR999_PMT18637
L-amino-acid oxidase-like; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.444
DR999_PMT10187
Putative G-protein coupled receptor 125.
      
 0.437
Your Current Organism:
Platysternon megacephalum
NCBI taxonomy Id: 55544
Other names: P. megacephalum, Platysternon macrocephalus, big-headed turtle
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