STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR999_PMT16786Transgelin-3. (458 aa)    
Predicted Functional Partners:
DR999_PMT02136
Arginine/serine-rich protein PNISR.
   
 
 0.890
DR999_PMT18108
Desmin.
   
 0.860
DR999_PMT16153
Hepatic leukemia factor.
   
0.857
DR999_PMT03192
F-actin-capping protein subunit alpha-1-like.
   
 0.848
DR999_PMT01431
O-phosphoseryl-tRNA(Sec) selenium transferase.
   
 
 0.838
DR999_PMT13440
RNA-binding protein with serine-rich domain 1.
   
 0.826
DR999_PMT03237
Aggrecan core protein.
   
 0.817
DR999_PMT03415
Breast carcinoma-amplified sequence 3-like.
   
 0.804
DR999_PMT16737
Serine/threonine-protein kinase SBK2.
   
 0.801
DR999_PMT03612
Eukaryotic translation elongation factor 1 alpha 1.
   
 0.798
Your Current Organism:
Platysternon megacephalum
NCBI taxonomy Id: 55544
Other names: P. megacephalum, Platysternon macrocephalus, big-headed turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.