STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR999_PMT15642Troponin I, slow skeletal muscle. (929 aa)    
Predicted Functional Partners:
DR999_PMT14300
Inhibitor of nuclear factor kappa-B kinase subunit alpha.
   
0.988
DR999_PMT00472
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.979
DR999_PMT08868
Mitochondrial Rho GTPase 2.
   
0.978
DR999_PMT01422
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.962
DR999_PMT18694
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.949
DR999_PMT17062
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.942
DR999_PMT08692
Leucine-rich repeat and death domain-containing protein 1.
    
 0.915
DR999_PMT08608
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.915
DR999_PMT22021
TNF receptor-associated factor.
    
 0.897
DR999_PMT21419
PH and SEC7 domain-containing protein 4.
    
  0.873
Your Current Organism:
Platysternon megacephalum
NCBI taxonomy Id: 55544
Other names: P. megacephalum, Platysternon macrocephalus, big-headed turtle
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.