STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR999_PMT09885Kinetochore protein NDC80-like protein; Belongs to the cytochrome P450 family. (507 aa)    
Predicted Functional Partners:
DR999_PMT09688
Regulation of nuclear pre-mRNA domain-containing protein 2.
     
 0.847
DR999_PMT14724
Sulfite oxidase.
     
 0.830
DR999_PMT01647
Coagulation factor XIII B chain-like.
  
 0.796
DR999_PMT16081
Nuclear receptor-interacting protein 3.
   
 0.776
DR999_PMT16099
CCR4-NOT transcription complex subunit 1.
   
 0.776
DR999_PMT03988
Desmocollin-1.
   
 0.772
DR999_PMT17341
Phospholipase A2.
    
  0.736
DR999_PMT13373
Ceramide synthase 5.
    
 0.713
DR999_PMT06364
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.664
DR999_PMT06383
Ras-like protein family member 11A.
  
 0.664
Your Current Organism:
Platysternon megacephalum
NCBI taxonomy Id: 55544
Other names: P. megacephalum, Platysternon macrocephalus, big-headed turtle
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