STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR999_PMT12476AFG3-like protein 1-like. (298 aa)    
Predicted Functional Partners:
DR999_PMT22563
Multidrug ABC transporter ATP-binding protein.
    
   0.847
DR999_PMT20896
Signal recognition particle 54 kDa protein; Belongs to the G-protein coupled receptor 2 family.
    
   0.847
DR999_PMT17052
Leucine zipper putative tumor suppressor 3; Belongs to the G-protein coupled receptor 2 family.
    
   0.847
DR999_PMT05702
Telethonin.
    
   0.847
DR999_PMT12664
Arf-GAP with dual PH domain-containing protein 2.
 
 
 
0.830
DR999_PMT12642
Keratocan.
 
 
 
0.779
DR999_PMT13833
Vascular cell adhesion molecule 1.
 
 
 
0.769
DR999_PMT01723
Cysteine/serine-rich nuclear protein 3.
    
  0.763
DR999_PMT22701
Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.
   
 
 0.747
DR999_PMT12457
MARVEL domain-containing protein 3.
 
 
 
0.747
Your Current Organism:
Platysternon megacephalum
NCBI taxonomy Id: 55544
Other names: P. megacephalum, Platysternon macrocephalus, big-headed turtle
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