STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR999_PMT02039Calpain-5. (198 aa)    
Predicted Functional Partners:
DR999_PMT17293
Calpain-10.
    
 
 0.952
DR999_PMT02072
Disintegrin and metalloproteinase domain-containing protein 17.
 
     0.937
DR999_PMT02562
ATP-dependent RNA helicase DDX19B.
    
 
 0.927
DR999_PMT06793
Copper transport protein ATOX1.
    
 
 0.889
DR999_PMT11523
Fanconi anemia-associated protein of 100 kDa.
    
 
 0.765
DR999_PMT11464
Programmed cell death protein 1-like.
    
 
 0.765
DR999_PMT17789
Poly(RC)-binding protein 3.
    
 
 0.634
DR999_PMT04674
Oncostatin-M-specific receptor subunit beta.
    
 
 0.634
DR999_PMT13532
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
    
 
 0.567
DR999_PMT02742
Signal transducer and activator of transcription 1-alpha/beta.
    
 
 0.567
Your Current Organism:
Platysternon megacephalum
NCBI taxonomy Id: 55544
Other names: P. megacephalum, Platysternon macrocephalus, big-headed turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.