STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR999_PMT06230Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (258 aa)    
Predicted Functional Partners:
DR999_PMT09604
GA-binding protein subunit beta-2.
   
 0.999
DR999_PMT22594
Single-stranded DNA-binding protein.
   
 0.993
DR999_PMT06126
Cytosolic carboxypeptidase 6.
   
 0.993
DR999_PMT11515
Charged multivesicular body protein 6.
    
 0.992
DR999_PMT13910
Paired amphipathic helix protein Sin3a.
    
 0.981
DR999_PMT20175
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.969
DR999_PMT20906
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
    
 0.953
DR999_PMT12362
Acyl-CoA desaturase-like.
    
 0.948
DR999_PMT05910
Caspase recruitment domain-containing protein 11.
    
 0.948
DR999_PMT20704
Sialoadhesin-like.
   
 0.938
Your Current Organism:
Platysternon megacephalum
NCBI taxonomy Id: 55544
Other names: P. megacephalum, Platysternon macrocephalus, big-headed turtle
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