STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR999_PMT00065Peptidyl-prolyl cis-trans isomerase D. (883 aa)    
Predicted Functional Partners:
DR999_PMT08986
SH3 domain-binding protein 1.
    
 0.910
DR999_PMT22994
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.842
DR999_PMT03178
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.842
DR999_PMT13699
Secretogranin-3.
    
 0.841
DR999_PMT14493
Mannose-6-phosphate isomerase.
    
 0.837
DR999_PMT24002
Ubiquinone biosynthesis methyltransferase UbiE.
    
 0.826
DR999_PMT11448
N-sulfoglucosamine sulfohydrolase.
  
 0.818
DR999_PMT13111
Alpha-galactosidase.
     
 0.807
DR999_PMT13312
Carboxymethylenebutenolidase-like protein.
    
  0.800
DR999_PMT18455
Alpha-galactosidase.
     
 0.796
Your Current Organism:
Platysternon megacephalum
NCBI taxonomy Id: 55544
Other names: P. megacephalum, Platysternon macrocephalus, big-headed turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.