STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF56639.1Dolichyl-phosphate beta-D-mannosyltransferase; COG0463 Glycosyltransferases involved in cell wall biogenesis. (248 aa)    
Predicted Functional Partners:
EKF56637.1
Hypothetical protein.
       0.817
EKF56638.1
COG0044 Dihydroorotase and related cyclic amidohydrolases.
       0.817
EKF56367.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
  
 
0.780
EKF53954.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
  
  0.775
EKF56640.1
Hypothetical protein; COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family.
 
 
  0.619
EKF56642.1
COG1587 Uroporphyrinogen-III synthase.
       0.600
EKF56641.1
Hypothetical protein.
       0.560
EKF56301.1
Bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; COG0380 Trehalose-6-phosphate synthase.
     
 0.556
EKF56044.1
COG1216 Predicted glycosyltransferases.
  
  
  0.553
EKF54545.1
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
   0.484
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.