STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF56275.1Oxidoreductase domain-containing protein; COG0673 Predicted dehydrogenases and related proteins. (478 aa)    
Predicted Functional Partners:
EKF56276.1
Secreted glycosyl hydrolase.
 
     0.938
EKF55408.1
Periplasmic protein.
  
     0.690
EKF55978.1
Oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
  
     0.625
EKF56882.1
Hypothetical protein.
  
     0.621
EKF55338.1
Hypothetical protein.
  
     0.505
EKF55332.1
Xylose isomerase domain-containing protein; COG1082 Sugar phosphate isomerases/epimerases.
 
 
  0.490
EKF55956.1
Cell surface receptor ipt/tig domain protein; COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.467
EKF54906.1
COG0153 Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
   
   0.463
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.