STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF56452.1Secreted lipase/esterase; COG0657 Esterase/lipase. (303 aa)    
Predicted Functional Partners:
EKF56453.1
COG3119 Arylsulfatase A and related enzymes.
 
   0.820
EKF56451.1
COG1472 Beta-glucosidase-related glycosidases; Belongs to the glycosyl hydrolase 3 family.
 
     0.776
EKF56448.1
COG5368 Uncharacterized protein conserved in bacteria.
 
     0.774
EKF56450.1
Hypothetical protein; COG4099 Predicted peptidase.
 
     0.770
EKF56854.1
Hypothetical protein; COG4677 Pectin methylesterase.
 
  
 0.769
EKF56454.1
Endonuclease/exonuclease/phosphatase; COG3568 Metal-dependent hydrolase.
 
     0.704
EKF56447.1
Hypothetical protein.
 
     0.671
EKF56446.1
RagB/SusD domain-containing protein.
 
     0.669
EKF56445.1
COG4771 Outer membrane receptor for ferrienterochelin and colicins.
 
     0.628
EKF56444.1
Two component regulator three Y domain-containing protein; COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
 
     0.587
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.