STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF56125.1Carboxylesterase; COG0400 Predicted esterase. (219 aa)    
Predicted Functional Partners:
EKF56123.1
COG0044 Dihydroorotase and related cyclic amidohydrolases.
   
   0.827
EKF56122.1
Double-transmembrane region domain-containing protein.
       0.808
EKF56124.1
Hypothetical protein.
       0.801
EKF56171.1
Hypothetical protein; COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
  
  0.570
EKF56333.1
Hypothetical protein.
  
     0.565
EKF54144.1
Hypothetical protein; COG1073 Hydrolases of the alpha/beta superfamily.
     
 0.530
EKF54823.1
Patatin; COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.
 
  
 0.483
EKF55781.1
Peptidase S54, rhomboid domain-containing protein; COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).
  
   
 0.460
EKF56121.1
Hypothetical protein.
       0.458
EKF54216.1
COG1577 Mevalonate kinase.
  
     0.425
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.