STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF56135.1Hypothetical protein. (385 aa)    
Predicted Functional Partners:
EKF56797.1
COG1404 Subtilisin-like serine proteases; Belongs to the peptidase S8 family.
   
 0.865
EKF55373.1
dTDP-4-dehydrorhamnose reductase-like protein; COG1091 dTDP-4-dehydrorhamnose reductase.
  
     0.752
EKF55926.1
COG0659 Sulfate permease and related transporters (MFS superfamily).
    
   0.749
EKF55135.1
COG0659 Sulfate permease and related transporters (MFS superfamily).
    
   0.749
EKF56091.1
Glyoxalase; COG0542 ATPases with chaperone activity, ATP-binding subunit.
  
     0.746
EKF55912.1
Ribonuclease HII.
  
     0.742
EKF54716.1
Hypothetical protein.
  
     0.734
EKF56372.1
Hypothetical protein; COG2388 Predicted acetyltransferase.
  
     0.703
EKF56140.1
Hypothetical protein.
  
     0.698
EKF56003.1
Hypothetical protein.
  
     0.678
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.