STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF55812.1COG3186 Phenylalanine-4-hydroxylase. (586 aa)    
Predicted Functional Partners:
EKF55004.1
COG2154 Pterin-4a-carbinolamine dehydratase.
  
 0.973
hisC
COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
 0.880
EKF55896.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
   
 
 0.872
EKF55430.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
   
 
 0.872
EKF54390.1
COG0077 Prephenate dehydratase.
     
 0.871
EKF54393.1
COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase.
     
 0.845
EKF54824.1
COG3508 Homogentisate 1,2-dioxygenase.
 
  
 0.839
EKF55326.1
COG0076 Glutamate decarboxylase and related PLP-dependent proteins.
    
 0.760
EKF54088.1
COG0076 Glutamate decarboxylase and related PLP-dependent proteins.
    
 0.760
EKF54825.1
COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins.
 
  
 0.639
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
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