STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF55813.1Hypothetical protein. (187 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
       0.743
EKF55815.1
Hypothetical protein.
 
     0.519
EKF55816.1
COG2515 1-aminocyclopropane-1-carboxylate deaminase.
 
     0.498
EKF55394.1
Hypothetical protein.
  
     0.495
EKF56170.1
Hypothetical protein.
  
     0.491
EKF54711.1
Hypothetical protein; COG3577 Predicted aspartyl protease.
  
     0.484
EKF54746.1
Hypothetical protein.
  
     0.482
EKF55794.1
Hypothetical protein.
  
     0.467
EKF56754.1
Hypothetical protein.
  
     0.445
EKF55812.1
COG3186 Phenylalanine-4-hydroxylase.
       0.427
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.