STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF55928.1Two component LuxR family transcriptional regulator; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. (209 aa)    
Predicted Functional Partners:
EKF55711.1
Multi-sensor signal transduction histidine kinase; COG2202 FOG: PAS/PAC domain.
 
  0.899
EKF55597.1
Sugar-binding sensor histidine kinase/response regulator hybrid; COG1879 ABC-type sugar transport system, periplasmic component.
  
 0.886
EKF55298.1
Two-component system sensor histidine kinase; COG4585 Signal transduction histidine kinase.
  
  0.876
EKF55575.1
Signal transduction histidine kinase; COG0457 FOG: TPR repeat.
  
  0.864
EKF54266.1
PAS/PAC sensor signal transduction histidine kinase; COG3292 Predicted periplasmic ligand-binding sensor domain.
   
 0.855
EKF55879.1
Histidine kinase; COG0642 Signal transduction histidine kinase.
 
 
 0.808
EKF56593.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
 0.795
EKF55666.1
Two-component system-sensor histidine kinase; COG2202 FOG: PAS/PAC domain.
 
 
 0.777
EKF55037.1
Two-component system sensor histidine kinase/response regulator,hybrid ('one-component system'); COG0642 Signal transduction histidine kinase.
  
 0.765
EKF56380.1
Histidine kinase; COG3292 Predicted periplasmic ligand-binding sensor domain.
  
 0.749
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
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